Histone database

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August undefined, 2024

WebbHistoneDB 2.0 – with variants. This histone database can be used to explore the diversity of histone proteins and their sequence variants in many organisms. The resource was established to better understand … WebbIt calculates the availability of data for specific mutants and for nucleosome surfaces. The database currently includes 42 assays on 677 mutants multiply covering 405 of the 498 residues across yeast histones H3, H4, H2A, and H2B. We also provide an interface with an extensible controlled vocabulary for research groups to submit new data.

HHMD: the human histone modification database - PubMed

Webb23 dec. 2014 · In 1964, Allfrey et al. firstly observed that lysine acetylation of histones plays an essential role in regulation of gene expression (Allfrey et al., 1964). Later and recent studies in epigenetics solidified this seminal discovery, and proposed acetylation as a key component of the "histone code" ( Jenuwein et al ., 2001 ). Webb1 jan. 1996 · The region of each of the core histones containing the histone fold motif is identified in the protein alignments. The database contains >1300 protein and nucleotide sequences. All sequences and … baimabenda mesa

QHistone Query Database - 中央研究院

Webb10 nov. 2024 · Database Database Profile HISTome2 General information Classification & Tag Contact information Publications Showing 1 to 2 of 2 entries Ranking All databases: 1314/5565 (76.406%) Modification: 75/256 (71.094%) Health and medicine: 294/1288 (77.252%) 1314 Citations Related Databases Citing Loading... Cited by Loading... WebbThe Histone Database is a comprehensive database of histone protein sequences including histone variants, classified by histone types and variants, maintained by National Center for Biotechnology Information.The creation of the Histone Database was stimulated by the X-ray analysis of the structure of the nucleosomal core histone … Webb1 nov. 2012 · The Histone Database is a curated and searchable collection of full-length sequences and structures of histones and nonhistone proteins containing histone-like … aquarium summer camp tampa

GPS-PAIL 2.0 - Prediction of Acetylation on Internal Lysines

The Histone Database: An Integrated Resource for Histones and …

Webb1 okt. 2024 · List of human histone proteins from the Histone Sequence Database for every histone gene, the available set of transcript and coding sequence GENCODE annotations were obtained from the Ensembl 105 database. Next, only protein-coding transcripts identical between Ensembl automated annotation and HAVANA manual … Webb29 mars 2024 · Title: Gene of the month: H3F3A and H3F3B. The histone variant H3.3 regulates the transcription of the hepatitis B virus. Title: The histone variant H3.3 regulates the transcription of the hepatitis B virus. H3F3A G34 mutation DNA sequencing and G34W immunohistochemistry analysis in 366 cases of giant cell tumors of bone and other … aquarium sump kit for saleWebbHuman Histone Modification Database (HHMD, http://bioinfo.hrbmu.edu.cn/hhmd) focuses on the storage and integration of histone modification datasets that were obtained from … baima bollone wikipedia

"Webb10 nov. 2024 · HISTome2 is a database of histone proteins, modifiers for multiple organisms and epidrugs. It focuses on the sub-classification of histone proteins as … " - Histone database

Histone database

WebbThe Histone Database is a comprehensive database of histone protein sequences including histone variants, classified by histone types and variants, maintained by … Webb1 mars 2006 · The Histone Database is a curated and searchable collection of full-length sequences and structures of histones and nonhistone proteins containing histone-like folds, compiled from major public databases. Several new histone fold-containing proteins have been identified, including the huntingtin-interacting protein HYPM.

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WebbThe Histone Sequence Database is an inclusive resource for the analysis of chromatin structure and function focused on histones and histone fold-containing proteins. … Webb12 dec. 2005 · The database contains an updated collection of multiple sequence alignments for the four core histones (H2A, H2B, H3, and H4) and the linker histones (H1/H5) from a total of 975 organisms. The database also contains information on the human histone gene complement and provides links to three-dimensional structures of …

Webbför 2 timmar sedan · Here we show that L. pneumophila secretes a eukaryotic-like histone deacetylase ... However, the only entry of misidentified HEK cells at the ICLAC database is ICLAC-00063, ... WebbHuman Histone Modification Database (HHMD, http://bioinfo.hrbmu.edu.cn/hhmd) focuses on the storage and integration of histone modification datasets that were obtained from laboratory experiments. The latest release of HHMD incorporates 43 location-specific histone modifications in human.

Webb1 jan. 2002 · With this revision, we have begun to include partial histone sequences, effectively increasing the taxonomic coverage of the database from 91 to 330 species. The sequence content of the Histone Database henceforth will be updated more frequently using software we have developed to scan GenBank updates specifically for histones. WebbPurpose: H2A.Z is an oncogenic histone variant that is overexpressed in cancers. Two isoforms of H2A.Z, H2AFZ and H2AFV, are identical except for a three-amino acid difference. ... GEO and TCGA databases were used to probe expressions and prognostic value of the two H2A.Z isoforms.

WebbHI stome data is available by browsing the contents. The database covers 5 types of histones, 8 types of their post-translational modifications and 13 classes of modifying …

Webb5 apr. 2024 · Using CHiMA, we identified 113 previously unreported histone marks in the examined databases including lysine lactylation (Kla), crotonylation (Kcr), 2 … aquarium sump pipeworkWebb20 nov. 2024 · The epigenetic modifications of histones are versatile marks that are intimately connected to development and disease pathogenesis including human cancers. In this review, we will discuss the many different types of histone modifications and the biological processes with which they are involved. Specifically, we review the enzymatic … aquarium sump pump aquarium sump plumbing diagramWebb20 apr. 2024 · Infants born to women with diabetes or obesity are exposed to excess circulating fuels during fetal heart development and are at higher risk of cardiac diseases. We have previously shown that late-gestation diabetes, especially in conjunction with a maternal high-fat (HF) diet, impairs cardiac functions in rat-offspring. This study … aquarium sump setupWebb23 okt. 2011 · The Histone Database stores selected manually curated information from GenBank records. The information stored as part of each record includes the GenBank … bai macarioWebb22 okt. 2011 · The Histone Sequence Database is an inclusive resource for the analysis of chromatin structure and function focused on histones and histone fold-containing … aquarium sump plumbing designWebb17 mars 2016 · HistoneDB 2.0 is a resource for the interactive comparative analysis of histone protein sequences and their implications for chromatin function. Database … bai macfarlane website